February 16, 2026

New Analysis Options Push the Limits of FLIM Imaging Modalities

From complex lifetime analysis to reproducible workflows in FLIM imaging

Fluorescence lifetime imaging microscopy (FLIM) provides rich information about molecular environments and interactions. However, extracting quantitative information from lifetime data often requires complex analysis workflows and careful interpretation of decay dynamics.
FLIM lifetime imaging microscopy of cells analyzed with NovaFLIM showing fast lifetime map and phasor-based species separation.

The Challenge: Extracting Reliable Information from FLIM Data

FLIM experiments generate multidimensional datasets that contain far more information than simple intensity images. Researchers frequently need to evaluate lifetime distributions, compare regions of interest, or distinguish between multiple fluorescent species within the same image.

This becomes challenging when:

  • fluorescence decays are complex or multi-exponential
  • many regions of interest need to be compared systematically
  • different analysis methods (fitting, phasor analysis, pattern matching) must be evaluated in parallel
  • reproducibility of analysis parameters becomes critical

Without streamlined analysis workflows, extracting robust and reproducible results from FLIM datasets can become time-consuming and difficult to standardize.

New Analysis Approaches for Modern FLIM Experiments

PicoQuant’s NovaFLIM and NovaISM analysis software expand the possibilities of fluorescence lifetime imaging microscopy by combining powerful analysis methods with streamlined workflows. This poster highlights several analysis approaches implemented in these platforms that help researchers extract quantitative information from FLIM datasets more efficiently.

These capabilities include:

  • Integrated FLIM contrast analysis combining decay fitting, phasor plots, pattern matching, and lifetime histograms for flexible interpretation of lifetime data
  • Advanced ROI handling enabling reproducible region selection and statistical comparison across multiple image areas
  • Batch analysis workflows allowing parallel evaluation of multiple ROIs or complete datasets
  • GPU-accelerated lifetime calculations for rapid processing and automated fitting suggestions
  • ISM-FLIM analysis with NovaISM, where pixel reassignment, computational sectioning, and deconvolution improve spatial resolution and contrast
FLIM data analysis in NovaFLIM software showing cellular lifetime image with ROI selection and parameter histograms.
FLIM image analysis in NovaFLIM showing ROI-based evaluation and parameter histograms used for quantitative comparison of fluorescence lifetime distributions.

Together, NovaFLIM and NovaISM create a unified analysis environment for quantitative lifetime imaging, enabling faster interpretation of complex FLIM experiments and more reproducible results.

Download the Poster

If you want to explore these analysis approaches in more detail, including example datasets and workflow illustrations, download the full poster.

Poster: New Analysis Options for FLIM Imaging Modalities

Poster on advanced FLIM analysis in NovaFLIM and NovaISM, enabling GPU-accelerated fitting, phasor plots and ISM-FLIM for higher resolution

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Evangelos Sisamakis

Product Manager, PicoQuant

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